Archive for July, 2011

X. laevis

Saturday, July 30th, 2011

One of our users asked for the files necessary to run ExpressionPlot on Affymetrix Xenopus laevis arrays: I was surprised to learn that there is no X. laevis genome yet. I took Affymetrix’s netaffx data file and probe tables and created some ExpressionPlot-compatible files by pretending each consensus sequence (basically Affymetrix’s idea of a transcript) […]

Prototype server returns

Saturday, July 9th, 2011

The prototype server is back up and running. Point your web browsers to Please let me know if you have any problems connecting and I will do my best to solve them expeditiously. Mission Bay, San Francisco: the new (temporary) home of the ExpressionPlot prototype server

Forthcoming in Genome Biology!!!

Saturday, July 9th, 2011

Our manuscript has been accepted by Genome Biology. Thanks to everyone who has contributed to the process.

A web-based framework for analysis of RNA-Seq and microarray gene expression data